The genome of the cultivated peanut sequenced

The genome of the cultivated polyploïd peanut Arachis hypogaearois has recently been sequenced by a consortium including three researchers of the “Genome Analysis and Evolution" LGDP team (UMR 5096 - CNRS / UPVD) and was published in May 2019 in the Nature Genetics journal.

Like many other crops, the cultivated peanut (Arachis hypogaea L.) is of hybrid origin and has a polyploid genome - that is, possessing a chromosomal heritage with more than two complete lots of chromosomes -that contains essentially complete sets of chromosomes from two ancestral species.

Exploring genomic diversity across 200 landraces and cultivars

The authors of the article report the genome sequence of peanut and studied the genomic structures of 200 landraces and cultivars. They show that after its polyploid origin, the genome has evolved mainly through deletions and by the flow of genetic information between the ancestral chromosomes (that is, homeologous recombination).

Reconstructing phenotypic variation in synthetic peanuts hybrids

Using new polyploid hybrids obtained by crossing the ancestral species, the researchers show how this can generate phenotypic changes such as spontaneous changes in flower color.

Finally, this study suggests that the diversity generated by these genetic mechanisms has contributed to favor the domestication of the polyploid A. hypogaea compared to other diploid species of Arachis grown by humans. These results highlight a potential greater importance of these genetic mechanisms in accounting for the higher than expected frequency of polyploids in domesticated plants.

See also

The genome sequence of segmental allotetraploid peanut Arachis hypogaea

David J. Bertioli, Jerry Jenkins, Josh Clevenger, Olga Dudchenko, Dongying Gao, Guillermo Seijo, Soraya C. M. Leal-Bertioli, Longhui Ren, Andrew D. Farmer, Manish K. Pandey, Sergio S. Samoluk, Brian Abernathy, Gaurav Agarwal, Carolina Ballén-Taborda, Connor Cameron, Jacqueline Campbell, Carolina Chavarro, Annapurna Chitikineni, Ye Chu, Sudhansu Dash, Moaine El Baidouri, Baozhu Guo, Wei Huang, Kyung Do Kim, Walid Korani, Sophie Lanciano, Christopher G. Lui, Marie Mirouze, Márcio C. Moretzsohn, Melanie Pham, Jin Hee Shin, Kenta Shirasawa, Senjuti Sinharoy, Avinash Sreedasyam, Nathan T. Weeks, Xinyou Zhang, Zheng Zheng, Ziqi Sun, Lutz Froenicke, Erez L. Aiden, Richard Michelmore, Rajeev K. Varshney, C. Corley Holbrook, Ethalinda K. S. Cannon, Brian E. Scheffler, Jane Grimwood, Peggy Ozias-Akins, Steven B. Cannon, Scott A. Jackson and Jeremy Schmutz. Nature Genetics | VOL 51 | MAY 2019 | 877–884 | doi.org/10.1038/s41588-019-0405-z

Modification date : 07 June 2023 | Publication date : 29 November 2019 | Redactor : Guillaume Cassiède-Berjon & Marie Mirouze